FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11848124
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG972800.05.6551127145
CGGTCGG29851.9931061E-45.553233145
CGGGGGG245300.05.448318145
CGACGCG27400.00230334585.2935586145
TACGCCC26150.00769206565.150411145
TCGCGCG26500.0089816195.0823874145
Produced by FastQC (version 0.11.5)