FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23711959
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG378600.015.5004835145
CGTATGC340300.015.435365145
TATGCCG273250.015.219226145
CTCGTAT419450.014.699081145
ATCTCGT523900.013.718421145
TCTCGTA463950.013.585915145
AATCTCG578950.012.789414145
TGCCGTC284450.012.633292145
ATGCCGT272800.012.349501145
GTATGCC362350.012.336663145
GTCAATC785000.011.933552145
GCCGTCT250000.011.389204145
TCAATCT818000.011.124414145
CCGTCTT244200.011.007003145
CGTCTGT1228950.010.552604145
CAATCTC785700.010.309222145
CTGTCAA1091100.010.05979145
GTCTGTC1287800.09.704686145
TGTCAAT953500.09.649923145
TCACGTC1486800.09.580138145
Produced by FastQC (version 0.11.5)