FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18609025
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG419900.015.828977145
CGTATGC530350.015.443483145
ATGCCGT394550.015.266108145
GTATGCC515000.015.101562145
TGCCGTC377800.015.098791145
CTCGTAT642250.015.088868145
TCGTATG589800.014.464421145
CCGTCTT308000.014.261044145
TCTCGTA703600.013.896821145
GCCGTCT336600.013.738392145
AATCTCG864750.013.6456175145
ATCTCGT785600.013.507314145
CGTCTTC312450.012.109308145
TTCAATC1201900.011.7235145
TCAATCT1132200.011.574564145
CAATCTC1066750.011.503332145
CTTCAAT1384050.010.4110365145
GCTTCAA1547800.010.325786145
GGCTTCA1749000.09.506769145
TGGCTTC1963500.09.350474145
Produced by FastQC (version 0.11.5)