FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14915023
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG362800.015.388075145
TATGCCG259900.015.2954855145
CGTATGC323600.014.902629145
ATGCCGT249300.014.319302145
CTCGTAT397050.014.224813145
TCTCGTA435100.013.846227145
GCCGTCT221850.013.773686145
CCGTCTT205600.013.629661145
GTATGCC324000.013.498612145
AATCTCG532050.013.078806145
ATCTCGT484950.012.945514145
TGCCGTC247050.012.896297145
ACTAATC700350.011.569435145
CTAATCT673050.011.55458145
CGTCTTC213600.011.288603145
TAATCTC649800.011.187967145
GTCACTA957050.010.743627145
CACTAAT793400.010.431607145
TCACTAA910100.010.112386145
AGTCACT1114850.010.054297145
Produced by FastQC (version 0.11.5)