FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22024800
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG370650.015.452844145
TCGTATG514200.014.772002145
CGTATGC460750.014.694073145
ATGCCGT362900.014.406091145
CTCGTAT566100.014.031671145
GTATGCC465450.013.487827145
TCTCGTA617750.013.456282145
ATCTCGT692750.013.222388145
GCCGTCT322900.013.118487145
TGCCGTC360200.013.086792145
CCGTCTT301400.013.045253145
CATCTCG799650.011.87131145
CGTCTTC311050.011.05756145
GATCATC1083350.010.720906145
ATCATCT1124900.09.784206145
CGCTGAT1391000.09.781278145
TGATCAT1207500.09.768544145
CTGATCA1318550.09.703667145
TCATCTC1096700.09.679257145
CCGCTGA1529050.09.651135145
Produced by FastQC (version 0.11.5)