FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082111

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082111
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19790155
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCGTAT341900.015.624659145
CGTATCA274400.015.611533145
CGCCGTA379400.015.398551145
CCGTATC311450.015.011136145
GCGTCGG72000.013.892767145
GTCGCCG507800.013.817352145
TCGCCGT439050.013.537611145
TGGTCGC604750.013.220315145
GGTCGCC562100.013.037062145
GTATCAT312250.012.465623145
GTGGTCG675100.012.132562145
CGGTGGT832050.011.290099145
TCGGTGG898100.011.032806145
TCTCGGT1031900.010.915799145
CTCGGTG995550.010.811988145
GATCTCG1207950.010.543019145
ATCTCGG1133650.010.370842145
TATCATT358200.010.117811145
ATCATTA325550.010.041556145
GGTGGTC865500.010.033026145
Produced by FastQC (version 0.11.5)