FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21253511
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG558900.015.796636145
CGTATGC702500.014.909838145
ATGCCGT522150.014.756705145
GCCGTCT449050.014.737624145
GTATGCC679650.014.664552145
TCGTATG779400.014.480369145
CTCGTAT851100.014.163254145
TGCCGTC500950.014.021059145
CCGTCTT406200.013.740489145
ATCTCGT1012150.013.707191145
TCTCGTA905950.013.417767145
AATCTCG1108900.012.955753145
CGTCTTC405900.012.125569145
GAATCTC1309800.011.632663145
GGAATCT1451750.011.3740015145
TGGAATC1598750.010.763452145
GACTGGA2162350.010.609604145
CGACTGG2178450.010.404751145
CCGACTG2359500.010.346739145
ACCGACT2500850.010.1590185145
Produced by FastQC (version 0.11.5)