FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082136

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082136
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21038565
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG559400.016.301966145
TCGTATG791000.015.845293145
CGTATGC706000.015.637849145
ATGCCGT522250.014.963118145
CCGTCTT408550.014.744756145
GTATGCC672800.014.480885145
CTCGTAT858800.014.467735145
TCTCGTA926050.014.184223145
TGCCGTC494450.013.957137145
GCCGTCT444800.013.885343145
ATCTCGT1031800.013.714062145
AATCTCG1139450.013.207294145
CGTCTTC406000.012.069865145
GTCAATC1515800.011.874536145
CAATCTC1383500.011.715866145
TCAATCT1465450.011.683976145
TGGTCAA2018300.011.267059145
GGTCAAT1705250.011.146189145
TATCGTA36250.010.998576145
GTGGTCA2234000.010.419309145
Produced by FastQC (version 0.11.5)