FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16849871
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA344500.014.748156145
GCCGTAT312200.014.672128145
CCGTATC286250.014.660271145
CGTATCA255250.014.538282145
TCGCCGT396350.013.568566145
GTATCAT293850.012.776532145
TGGTCGC531550.012.694468145
GCGTCGG50700.012.294175145
GGTCGCC496600.012.245151145
GTGGTCG594300.011.951689145
GTCGCCG450250.011.654503145
CGGTGGT723450.010.920107145
TCGGTGG776700.010.647343145
CTCGGTG861000.010.3709145
TATCATT342400.010.160531145
TCTCGGT889200.010.156113145
ATCATTA304250.09.814667145
GGTGGTC753700.09.779831145
ATCTCGG971050.09.270196145
GATCTCG1025050.09.220223145
Produced by FastQC (version 0.11.5)