FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21580749
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG557100.015.405529145
CGTATGC700250.015.216764145
ATGCCGT521100.015.190065145
TCGTATG782050.014.950577145
CTCGTAT854450.014.76965145
TGCCGTC494100.014.538409145
GTATGCC672750.014.2656765145
GCCGTCT436850.014.253415145
AATCTCG1131800.013.660899145
TCTCGTA919950.013.647142145
CCGTCTT401150.013.624565145
ATCTCGT1030000.013.4205885145
CGTCTTC395300.012.5792675145
CAATCTC1380900.011.721537145
ACAATCT1480650.011.48507145
CACAATC1591650.010.797968145
TTCACAA2067400.010.255561145
TCACAAT1764900.09.931029145
TCTTCAC2466950.09.70524145
CTTCACA2292250.09.493072145
Produced by FastQC (version 0.11.5)