FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14570280
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACAC44450.012.7130581
ACACTCA39750.010.8670364
TACACTC43550.010.7463493
TTACACT51500.08.9486542
CACTCAT62000.07.31515465
GGGGGGG65200.06.66700651
CTAGATC18650.06.0990157140-144
ACTCATC84750.05.52165376
CACACGT144350.05.057113140-144
Produced by FastQC (version 0.11.5)