FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14680723
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACAAC84600.08.6182851
GTATACG65750.08.42771
GTCTCCA96200.08.0338181
GTACAAG88650.07.8133291
GTCTACT47450.07.5292391
GTGTACG77700.07.50689271
GTGTTCA101900.07.4413271
GTGCAAC66700.07.4331741
GTATAAC54750.07.1911921
GTACAAT68450.06.81706951
GTGTAAC33200.06.8079261
GTGTACA61400.06.7685831
GTCTACG105700.06.6909531
GTGTAAG31751.2732926E-116.65955921
GTGTAAT52650.06.6471291
GTGCACG71300.06.6468371
GTGTTAG15551.4695988E-46.56430671
GTCTCCG147700.06.51605371
GTCTTCG163200.06.43329671
GTGTTCG128150.06.3722181
Produced by FastQC (version 0.11.5)