FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14850354
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT41050.012.9626161
TGAGTAG40150.012.91124253
GTGAGTA43450.012.5937952
GAGTAGG54300.09.8112364
TAGCATG36700.09.8083478
TAGGAGG61400.08.3249557
AGTAGGA104600.05.71258165
AGGAGGG106850.05.52498638
CTAGATC13900.05.4905186140-144
CTAGGAG23350.05.36476250-54
GTAGGAG105500.05.18624456
Produced by FastQC (version 0.11.5)