FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11863876
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA129500.07.45019341
TCGGAAG158350.06.59299043
AGAGCGT162950.06.3626888
AGTGAGT36301.4551915E-116.14876031
GAGCGTC171800.06.07683329
GTGAGTA36451.0186341E-105.92592572
ATCGGAA186250.05.762
TGAGTAG30458.3095074E-85.6748773
AAGAGCG202000.05.3108917
GAGTAGG40508.656571E-95.15555574
TAGATCT45700.05.13610540-44
Produced by FastQC (version 0.11.5)