FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16121128
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGACC30200.08.3453177
GTTAGAC32100.08.2946516
TAGACCC35950.07.6131828
TAGTTAG47200.06.55630064
CAACACT94000.06.43625078
AACACTA107050.05.5843549
GCAACAC118050.05.4288247
GGTCTAA31256.093305E-75.382121
Produced by FastQC (version 0.11.5)