FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17361169
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGTC61150.012.8242448
TTAGTCC80000.09.8025319
CCTTAGT80800.09.5273947
CCCTATT77500.09.2832498
CTCCCTA77400.09.20229156
GCTCCCT86500.08.8169125
TCCCTAT90350.08.0425727
TGCTCCC103700.07.49683864
CTACCTC126500.06.5480171
GTATGCT149250.06.28016231
TCCTTAG136850.05.99324136
TACCTCC149350.05.8329862
TATGCTC149800.05.5751552
CTCCTTA150200.05.508775
ACCTCCT173550.05.2685353
CCCCCCA33450.05.139208310-14
Produced by FastQC (version 0.11.5)