FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17461548
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG45700.09.1365495
CCCCTTA51550.08.2398844
CTTAGAG57350.07.90808537
CCTTAGA58500.07.7527386
TACCCCT65600.07.24546052
TTAGAGC54500.07.13294558
CTACCCC61000.07.1261951
TAGAGCC64350.06.82421889
ACCCCTT77650.06.02727033
Produced by FastQC (version 0.11.5)