FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082545

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082545
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17461548
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG46000.08.1373325
CCCCTTA54400.07.93953474
CTTAGAG53700.07.37224867
TTAGAGC52650.06.83570348
CTACCCC60750.06.81956531
CCTTAGA58000.06.5774796
TAGAGCC66000.05.9983139
TACCCCT67350.05.7741152
ACCCCTT79350.05.35338643
Produced by FastQC (version 0.11.5)