FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16530568
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC88650.024.4625513
TACACAT93700.022.429495
ATACACA109600.020.3126774
ACACATC110450.019.482746
CACATCT119500.017.8252477
CTTATAC114250.017.0556141
TTATACA135000.014.5197672
CATCTGA150650.013.6647179
ACATCTG158900.013.408078
TAGATCT67500.05.67680235-39
GTACACA67200.05.0339015
Produced by FastQC (version 0.11.5)