FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16827989
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA124750.012.6947459
GATCGGA134500.011.7512571
AGAGCAC134500.011.4534048
TCGGAAG209200.08.0636683
ATCGGAA232150.07.54600952
AAGAGCA227800.07.3628397
GAAGAGC288750.05.9083946
GGAAGAG300700.05.6735915
AGTCACT50900.05.06369725-29
Produced by FastQC (version 0.11.5)