FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16827989
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA132050.011.5235431
AGAGCGT178300.08.3569918
TCGGAAG202650.07.8161373
GAGCGTC213800.07.4070619
AAGAGCG220050.07.36168537
ATCGGAA223500.07.18550062
TAGATCT50300.06.583399340-44
GAAGAGC286650.06.0029136
AGTGTAG61600.05.53935935-39
GGAAGAG303050.05.4642385
GAGTGTA62200.05.323893535-39
Produced by FastQC (version 0.11.5)