FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15020944
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC105600.018.0913073
TACACAT110500.016.9383495
CTTATAC107800.016.4338071
ACACATC121850.014.8879046
CACATCT129400.014.0741337
ATACACA145950.013.7303734
CATCTGA145800.012.1961449
TTATACA153100.011.6787862
ACATCTG170200.010.9538558
CTAGATC16850.05.2980943140-144
GTAGATC94250.05.27121135-39
GATCTAG7301.2472992E-75.128624430-34
Produced by FastQC (version 0.11.5)