FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13562383
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA56750.010.0194919
AGCCACT98350.08.5624087
AAGCCAC103950.08.3088566
GCCACTC70750.07.73163948
CCACTAA52250.06.8876049
ACAAAGC154700.06.1510023
GCCACTA63450.05.6718258
AGGCCTA35700.05.52634775-79
CTCACTA40050.05.17580915-19
TACAAAG185300.05.1741442
CCCCTAA38300.05.1500735100-104
Produced by FastQC (version 0.11.5)