FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005082910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005082910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14993822
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACCCC59550.08.7052891
TACCCCA71500.07.9552452
ACCCCAA83550.06.6355473
CCCCAAT79500.06.06792454
CCCAATT85550.05.80713035
GGTAAAA189850.05.46115351
CATCTAA82250.05.42735539
CACTACC94300.05.42099671
CTACCAC98750.05.249623
CACATCT98600.05.1115627
GGTGAAA214500.05.00139861
Produced by FastQC (version 0.11.5)