FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13697020
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCAC82150.09.2020378
GAGCACA81200.09.1321359
GATCGGA116400.07.1004111
AAGAGCA161400.05.26357367
GAAGAGC174000.05.25480656
TCGGAAG163200.05.02931833
Produced by FastQC (version 0.11.5)