FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14987365
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG32300.09.1371835
TTAGAGC40550.08.5206778
CTTAGAG41700.07.59534657
CCCCTTA38350.07.5105794
CCTTAGA41100.07.35594466
GTGCACA54150.06.428091
TAGAGCC55600.06.0848079
CACACAA63300.05.687814
GCACACA66250.05.43524933
Produced by FastQC (version 0.11.5)