FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15083042
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT46950.015.4508711
GTGAGTA48650.014.3636792
TGAGTAG47700.014.3463113
GAGTAGG48950.013.6861444
TAGGAGG58100.011.6474357
TAGCATG41450.011.2889358
AGTAGGA81850.08.3567935
GTAGGAG87900.07.9444066
CCTTTAG75200.07.1844624
GGAGGGG102750.07.1463449
CTAGGAG22300.06.84295950-54
AGGAGGG106950.06.79836948
TTAGCAT87950.06.4665087
CTTTAGC107450.05.36066065
TTCTAGG27300.05.27327350-54
TCTAGGA29450.05.13271250-54
Produced by FastQC (version 0.11.5)