FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14339732
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA48800.016.3716757
ACACTAT55000.014.3951248
CACTATA62150.012.6232389
CCACTCA58750.010.4134949
AAACACT98700.08.6050186
GCCACTC79100.08.1893878
CAAACAC102100.08.0364835
CCCCTTA42150.07.85504534
ACCAAAC112100.07.6420533
CCAAACA120150.07.30843734
AGAGCAC86900.06.37758648
GTACCCC67250.05.99056961
GGCCTAA20450.05.985152775-79
AGCCACT103850.05.8218737
TACCCCT69700.05.5780932
AAGCCAC115100.05.50293356
GAGCACA99350.05.4334899
TACCAAA184400.05.1929662
ATACCAA198100.05.1026091
GGGGGGT21950.002002635.00558041
Produced by FastQC (version 0.11.5)