FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12213241
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGTCAC35400.053.48249
GGGAGTC59200.032.9538357
GGGGAGT61000.031.2733486
GGAGTCA67850.028.3282538
TGGGGAG70050.027.5413385
CATGGGG87600.022.0411433
ATGGGGA92650.021.2152654
ACATGGG99100.019.775892
TACATGG102250.019.3840621
AGTGTAG37450.06.690123695-99
TAGTGGC44000.05.7267594100-104
CTCTGAC79550.05.429686525-29
AGTCACA76100.05.33522610-14
Produced by FastQC (version 0.11.5)