FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13710279
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA163800.08.3062061
AGAGCGT178850.07.76743368
GAGCGTC181050.07.5933979
TAGATCT41700.06.732893540-44
AAGAGCG210100.06.6125747
TCGGAAG267400.05.5995193
AGATCTC54400.05.58453240-44
ATCGGAA280600.05.54166462
AGATCGG162450.05.255466140-144
GAAGAGC276700.05.2551066
TAGATCG44050.05.000596140-144
Produced by FastQC (version 0.11.5)