FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12174761
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGTC27900.014.7093878
TTAGTCC28000.014.1425779
CCTTAGT41550.010.5709277
CCTCTCA52850.08.0382455
CCCTCTC65850.06.99807264
CTCTCAT64200.06.84146366
GATCGGA82300.06.7388821
TCCTTAG69900.06.3865866
TACCTCC90650.05.32211732
CTACCTC95750.05.11525251
GCCCTCT96600.05.0685773
Produced by FastQC (version 0.11.5)