FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12174761
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGTC27850.010.5947348
TTAGTCC29000.010.4227599
CCTCTCA52900.09.3873045
CCTTAGT39350.07.8645017
CTCTCAT64600.07.46431166
CCCTCTC68900.07.41628744
GATCGGA85300.05.48555561
GCCCTCT93600.05.0747193
Produced by FastQC (version 0.11.5)