FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083267

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083267
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12731302
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGTCC27750.014.5297499
CTTAGTC30200.013.3516418
CCTTAGT39550.011.2869057
CTCTCTC86500.07.49466664
GCTCTCT87500.07.24436863
TCCTTAG65600.07.1323916
TCTCTCA76100.07.0959369
TCTCTCT104300.06.21280677
TACCTCC97000.05.8688832
TGCTCTC127650.05.5322952
CTCCTTA98600.05.1112275
Produced by FastQC (version 0.11.5)