FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12920941
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA45200.010.18862159
ACCACTA51050.07.58915578
GCCACTC64050.06.7335838
CCTAGAC14250.06.0579095120-124
ACAACAC82900.05.47177363
AGCCACT75700.05.41644337
CACCACT77300.05.3043317
GGCCTAA16900.05.2784175-79
CTAGACC16300.05.2077584120-124
GAGCACA77750.05.0769959
CCACTAC77850.05.0704739
Produced by FastQC (version 0.11.5)