FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17842320
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT48400.06.45978741
GTGAGTA49200.06.2927432
TGAGTAG44300.06.01336533
TAGCATG44752.1827873E-115.46901758
GAGTAGG56451.8189894E-125.1006084
Produced by FastQC (version 0.11.5)