FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18265693
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACTAGC25850.010.8604043
CTAGCAA28900.010.7102175
ACTAGCA31950.08.7868274
CTACACA49700.07.8212424
TTACTAG43500.07.61303852
ACACATA70100.05.95586356
TACACAT75700.05.61027055
TAGCAAC56050.05.3939696
Produced by FastQC (version 0.11.5)