FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13182476
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCGT6450.09.59948590-94
TGCTAGC7050.09.39584685-89
ATGCTAG8450.07.839137685-89
CCTAAAA51050.07.8037941
GCTAGCG8700.07.61387685-89
CTAGATC7902.3646862E-115.8325276140-144
TTAGGGG16750.05.07220960-64
Produced by FastQC (version 0.11.5)