FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13013341
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA91700.014.4585891
AGAGCAC91150.014.1369798
GAGCACA92500.014.0084819
TCGGAAG147250.09.4007853
ATCGGAA174000.08.3284662
AAGAGCA170800.08.3030697
GAAGAGC167600.08.1610916
GGAAGAG217950.06.50713255
CGGAAGA250150.05.6441644
CACACGT56900.05.313703510-14
ACACGTC61300.05.09670510-14
Produced by FastQC (version 0.11.5)