FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14881906
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATC17900.05.8718486140-144
ACACTAT41358.185452E-115.57119858
CACTATA44852.3646862E-115.4574619
AACACTA39103.6452548E-95.3394367
Produced by FastQC (version 0.11.5)