FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18072324
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGTG6455.168815E-511.2101925
ATCCTAG13101.9460094E-68.273813
TCCTAGT9700.0030660387.45171454
GATCGGA140550.06.07489971
TCGGAAG190700.05.1910533
Produced by FastQC (version 0.11.5)