FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15296129
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA50950.017.6624139
GCCACTC64800.014.1095418
AGCCACT100350.09.3263177
AAGCCAC110100.08.4348926
ACGTTAA35350.08.1458484
GGCCTAA28050.07.23746180-84
ACAAAGC163250.06.61862753
TACAAAG187500.05.68578342
ATACAAA232700.05.04701041
Produced by FastQC (version 0.11.5)