FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13780136
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC106700.020.0016043
ACACATC107000.019.1071976
TACACAT111950.018.2623485
CACATCT118650.017.4114747
ATACACA139300.015.0606284
CATCTGA137300.014.7338799
ACATCTG144900.014.5054488
CTTATAC141750.014.23928451
TTATACA179550.011.5259062
TAGATCT57550.06.931341635-39
GTAGATC68400.06.75821235-39
AGATCTC61600.06.380732540-44
ACACCAC91450.05.43166
TCTCGGT81200.05.425677340-44
TGACGCT107150.05.34818710-14
CTGACGC94650.05.339519510-14
GTTACCC79450.05.20891671
GATCTCG79450.05.16463440-44
TCTGACG93500.05.12800410-14
CTCGGTG71850.05.06970140-44
Produced by FastQC (version 0.11.5)