Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005083742 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16746121 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 22825 | 0.0 | 9.074806 | 1 |
AGAGCAC | 20425 | 0.0 | 8.986669 | 8 |
GAGCACA | 20915 | 0.0 | 8.707295 | 9 |
GATCTAA | 1355 | 1.9503105E-4 | 6.9973536 | 1 |
TCGGAAG | 26690 | 0.0 | 6.971335 | 3 |
AAGAGCA | 31680 | 0.0 | 6.2483907 | 7 |
ATCGGAA | 32280 | 0.0 | 5.987508 | 2 |
GGTAGAA | 11850 | 0.0 | 5.8470263 | 1 |
GAAGAGC | 35545 | 0.0 | 5.5487185 | 6 |
GATCATG | 18070 | 0.0 | 5.5295806 | 1 |
GTATATG | 12930 | 0.0 | 5.527864 | 1 |
GTTGCTA | 4645 | 7.2759576E-12 | 5.495562 | 1 |
GTTGAAT | 10715 | 0.0 | 5.377305 | 1 |
GATCTCT | 8990 | 0.0 | 5.3544393 | 1 |
GATCTCG | 20025 | 0.0 | 5.353954 | 1 |
GTTGTGA | 8610 | 0.0 | 5.336631 | 1 |
GATCACG | 16065 | 0.0 | 5.311717 | 1 |
GGGGAGG | 10375 | 0.0 | 5.272334 | 1 |
GTTAACG | 3185 | 9.373198E-7 | 5.2668166 | 1 |
GGTAGAC | 6955 | 0.0 | 5.243275 | 1 |