FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16746121
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA228250.09.0748061
AGAGCAC204250.08.9866698
GAGCACA209150.08.7072959
GATCTAA13551.9503105E-46.99735361
TCGGAAG266900.06.9713353
AAGAGCA316800.06.24839077
ATCGGAA322800.05.9875082
GGTAGAA118500.05.84702631
GAAGAGC355450.05.54871856
GATCATG180700.05.52958061
GTATATG129300.05.5278641
GTTGCTA46457.2759576E-125.4955621
GTTGAAT107150.05.3773051
GATCTCT89900.05.35443931
GATCTCG200250.05.3539541
GTTGTGA86100.05.3366311
GATCACG160650.05.3117171
GGGGAGG103750.05.2723341
GTTAACG31859.373198E-75.26681661
GGTAGAC69550.05.2432751