Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005083763 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15646899 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACACTA | 4145 | 0.0 | 12.678244 | 7 |
ACACACT | 5635 | 0.0 | 10.731387 | 6 |
ACACTAT | 7115 | 0.0 | 8.195728 | 8 |
AACACAC | 7455 | 0.0 | 8.014722 | 5 |
CTAGCTA | 1500 | 0.0 | 7.8709774 | 25-29 |
CACTATA | 8055 | 0.0 | 7.596802 | 9 |
ATCTAGC | 1855 | 0.0 | 6.4422894 | 25-29 |
CAACACA | 9875 | 0.0 | 6.1235065 | 4 |
TCTAGCT | 2095 | 0.0 | 6.047901 | 25-29 |
ACAACAC | 10730 | 0.0 | 5.7698207 | 3 |