FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17520715
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA45000.06.7199359
CCTTCAT202850.06.1506981
CCTTTAC156800.06.1423021
CCTACAC87400.05.76024531
CCTGCAT247050.05.2570061
CCTTCAC218200.05.18298861
CATGCAT53101.4551915E-115.08405831
CCTCCAT176750.05.07748941
Produced by FastQC (version 0.11.5)