FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14767128
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACTA28553.5652192E-106.63636161
TACTTAG17501.0088922E-46.24620151
TACATAG61350.05.8202861
TACCTCC100450.05.51348831
TGCACAT115900.05.4072671
TACATGC79550.05.40473751
TACTCTA32402.3598477E-75.39795261
TACTTAT89450.05.2953641
TACACTT73600.05.2476021
TACATCT103150.05.2278761
TACCCTA25108.310215E-55.2259061
TACTTCT139800.05.2126151
TACCTCA73950.05.12422231
TACATGG112650.05.11044451
TACATTG110850.05.06194971
TACACGC79800.05.02253061
ACACTCT61200.05.0010441
Produced by FastQC (version 0.11.5)