FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16087601
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTTA42600.07.0979244
CCCTTAG45900.05.8031415
TAGAGCC52450.05.48959069
CTTAGAG52350.05.3629097
CCTTAGA56600.05.2145876
CGCAATT86450.05.07991554
Produced by FastQC (version 0.11.5)