FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16469944
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA43750.014.480489
GCCACTC70400.08.4875788
AGCCACT82400.07.5136277
AAGCCAC103550.06.74372776
GGCCTAA20400.06.705156375-79
TACGTTA40502.6921043E-105.51365473
ACGTTAA43756.730261E-115.4324724
CACACGT232900.05.1932974140-144
TACAAAG132500.05.05591772
Produced by FastQC (version 0.11.5)