FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11746249
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACAC34050.08.8799877
CCTCACA41150.07.6977686
CCCCTAG8050.07.33307115-19
CACACCT57200.06.5446669
ACCCAAC53650.06.1723925
CCCTCAC56150.05.89757445
ACCCTCA64850.05.88373954
CCCTAGA11600.05.709496515-19
CCCAACC59300.05.7059136
GCACCCT69600.05.58688932
TCACACC66650.05.50871328
CCTAGAC12450.05.319691715-19
CACCCAA65200.05.18964674
Produced by FastQC (version 0.11.5)