FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16791196
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG31500.011.6437823
AGTGAGT36300.010.2518451
GTGAGTA38950.09.788982
GAGTAGG55550.07.63844
TAGGAGG58850.06.7224417
AGTAGGA71900.05.8018945
CTAGGAG15600.05.16199950-54
Produced by FastQC (version 0.11.5)